STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47986.1Glycosyl transferase group 1. (379 aa)    
Predicted Functional Partners:
AEI47988.1
Hypothetical protein.
       0.791
AEI47016.1
Glycosyl transferase group 1.
 
     0.775
AEI47987.1
Hypothetical protein.
       0.773
AEI47989.1
Glycosyl transferase family 2.
  
    0.773
AEI48161.1
Glycosyl transferase group 1.
  
     0.684
AEI47995.1
Glycosyl transferase group 1.
 
     0.664
AEI47991.1
Glycosyl transferase group 1.
 
     0.650
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
    0.592
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
     0.590
AEI46636.1
Glycosyl transferase family 39.
  
     0.574
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.