STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI47993.1Glycosyl transferase, group 1. (323 aa)    
Predicted Functional Partners:
AEI47996.1
Glycosyl transferase group 1.
 
     0.828
AEI47992.1
Glycosyl transferase, group 1.
 
    
0.825
AEI47995.1
Glycosyl transferase group 1.
 
     0.822
AEI47997.1
Glycosyl transferase family 2.
 
    0.809
AEI47994.1
Hypothetical protein.
       0.773
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
    0.720
AEI50325.1
Glycosyl transferase family 39.
  
     0.712
AEI46636.1
Glycosyl transferase family 39.
  
     0.682
AEI47998.1
Acyl-(acyl carrier protein)-like protein.
 
   
 0.650
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
     0.618
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.