STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI47995.1Glycosyl transferase group 1. (403 aa)    
Predicted Functional Partners:
AEI47996.1
Glycosyl transferase group 1.
 
    
0.833
AEI47993.1
Glycosyl transferase, group 1.
 
     0.818
AEI47997.1
Glycosyl transferase family 2.
 
    0.806
AEI47992.1
Glycosyl transferase, group 1.
       0.773
AEI47994.1
Hypothetical protein.
       0.773
AEI47991.1
Glycosyl transferase group 1.
 
     0.735
AEI47986.1
Glycosyl transferase group 1.
 
     0.664
AEI47990.1
Glycosyl transferase group 1.
 
     0.607
AEI47998.1
Acyl-(acyl carrier protein)-like protein.
     
 0.576
AEI47016.1
Glycosyl transferase group 1.
 
     0.521
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.