STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48042.1ATPase, F1 complex, delta/epsilon subunit. (79 aa)    
Predicted Functional Partners:
AEI46599.1
ATP synthase subunit delta.
 
 0.999
AEI46600.1
ATP synthase subunit b.
  
 0.999
AEI46601.1
ATP synthase subunit c.
  
 0.999
AEI46602.1
ATP synthase subunit a.
 
 0.999
AEI47383.1
ATP synthase subunit alpha.
 
 0.999
AEI47385.1
ATP synthase gamma chain.
 
 0.999
AEI48043.1
ATP synthase subunit beta.
 
 0.999
AEI47999.1
WbqC-like family protein.
  
 0.989
AEI51610.1
WbqC-like family protein.
  
 0.989
AEI48097.1
50S ribosomal protein L17.
  
 
 0.965
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.