STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48044.1Integral membrane sensor signal transduction histidine kinase. (395 aa)    
Predicted Functional Partners:
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
 0.864
AEI48656.1
Multi-sensor hybrid histidine kinase.
  
 
 0.828
AEI51819.1
Multi-sensor signal transduction histidine kinase.
  
 
 0.811
AEI47618.1
Two component transcriptional regulator, AraC family.
  
 
 0.798
AEI51540.1
Response regulator receiver protein.
 
 
 
 0.789
AEI48951.1
Hypothetical protein.
 
   
 0.750
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
 
 0.698
AEI48185.1
Hypothetical protein.
  
 
   0.692
AEI48772.1
Outer membrane chaperone Skp (OmpH).
  
     0.685
AEI49443.1
Transketolase domain-containing protein.
    
 0.667
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.