STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48061.1Outer membrane efflux protein. (400 aa)    
Predicted Functional Partners:
AEI48063.1
Heavy metal efflux pump, CzcA family.
  
 0.953
AEI49784.1
Heavy metal efflux pump, CzcA family.
  
 0.947
AEI49916.1
Heavy metal efflux pump, CzcA family.
  
 0.942
AEI48062.1
Efflux transporter, RND family, MFP subunit.
 
   0.902
AEI49933.1
Efflux transporter, RND family, MFP subunit.
 
   0.795
AEI49449.1
Efflux transporter, RND family, MFP subunit.
  
  0.687
AEI51579.1
Biotin/lipoyl attachment domain-containing protein.
  
  0.687
AEI48058.1
Outer membrane efflux protein.
    
  0.665
AEI47137.1
Outer membrane efflux protein.
  
  
  0.616
AEI47139.1
Efflux transporter, RND family, MFP subunit.
   
  0.615
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.