STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48069.1Phosphate transporter. (472 aa)    
Predicted Functional Partners:
AEI48031.1
Lysyl-tRNA synthetase.
   
    0.567
AEI47136.1
Heat shock protein 70.
 
   
 0.511
AEI48068.1
OmpA/MotB domain protein.
     
 0.489
AEI47497.1
Uridylate kinase.
   
    0.486
AEI50717.1
Glutamate synthase (ferredoxin).
  
  
 0.475
AEI48070.1
Hypothetical protein.
       0.461
AEI47271.1
Histidine biosynthesis bifunctional protein hisIE.
     
 0.433
AEI51179.1
Alkaline phosphatase.
  
  
 0.415
AEI48490.1
Protein-export membrane protein SecD.
  
  
 0.412
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.