STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48078.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
AEI51231.1
Alpha/beta hydrolase fold protein.
  
     0.567
AEI49599.1
Von Willebrand factor type D protein.
  
     0.550
AEI50232.1
Glucose/sorbosone dehydrogenase-like protein.
  
     0.512
AEI50298.1
Methyltransferase FkbM family.
  
     0.472
AEI48077.1
Hypothetical protein.
       0.470
AEI50201.1
5'-nucleotidase.
  
     0.470
AEI47560.1
Hypothetical protein.
  
     0.455
AEI50968.1
Polyribonucleotide nucleotidyltransferase.
  
    0.448
AEI48178.1
Hypothetical protein.
  
    0.437
AEI51131.1
Glucose/sorbosone dehydrogenase.
  
     0.429
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.