STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48095.1Bile acid:sodium symporter. (311 aa)    
Predicted Functional Partners:
AEI48094.1
3-oxoacyl-(acyl-carrier-protein) reductase.
  
    0.732
AEI48093.1
Lysine exporter protein (LYSE/YGGA).
       0.646
AEI51697.1
Demethylmenaquinone methyltransferase-like protein.
 
     0.514
AEI47595.1
Demethylmenaquinone methyltransferase-like protein.
 
     0.488
AEI46927.1
Demethylmenaquinone methyltransferase-like protein.
 
     0.476
AEI48096.1
Carbamoyl-phosphate synthase, small subunit.
       0.414
AEI50523.1
Putative transmembrane transport protein.
  
     0.403
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.