STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48158.1Glycine C-acetyltransferase. (422 aa)    
Predicted Functional Partners:
AEI47824.1
Glycine dehydrogenase (decarboxylating).
  
 
 0.935
AEI51407.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
  
 
0.919
AEI47917.1
Glycine hydroxymethyltransferase.
  
 
 0.917
AEI49051.1
Threonine aldolase.
   
 
 0.909
AEI50282.1
FAD dependent oxidoreductase.
    
 0.902
Runsl_3923
tRNA-Gln.
 
 
 0.853
AEI48157.1
Oxidoreductase domain protein.
       0.511
AEI51406.1
L-threonine 3-dehydrogenase.
 
  
 0.510
AEI48159.1
Hypothetical protein.
       0.472
AEI47166.1
3-oxoacyl-(acyl-carrier-protein) synthase 2.
   
 0.447
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.