STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48210.1Glycine cleavage system H protein. (125 aa)    
Predicted Functional Partners:
AEI47824.1
Glycine dehydrogenase (decarboxylating).
 0.999
AEI48711.1
Aminomethyltransferase.
 0.999
AEI47575.1
Dihydrolipoamide dehydrogenase.
 
 
 0.984
AEI49390.1
Dihydrolipoamide dehydrogenase.
 
 
 0.983
AEI47917.1
Glycine hydroxymethyltransferase.
  
 
 0.973
AEI46639.1
Bifunctional protein folD.
  
 
 0.949
Runsl_4050
Lipoyl synthase.
 
 0.937
AEI51703.1
5,10-methylenetetrahydrofolate reductase.
    
 0.930
AEI51932.1
Thymidylate synthase.
  
 
 0.918
AEI50717.1
Glutamate synthase (ferredoxin).
   
 
 0.875
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.