STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48216.1Efflux transporter, RND family, MFP subunit. (360 aa)    
Predicted Functional Partners:
AEI48217.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.978
AEI49207.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.942
AEI48218.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
   0.931
AEI47334.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.919
AEI49208.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
   0.822
AEI51916.1
Acriflavin resistance protein.
 
  0.799
AEI47138.1
Acriflavin resistance protein.
 
  0.798
AEI49343.1
Acriflavin resistance protein.
  
  0.758
AEI49648.1
Acriflavin resistance protein.
  
  0.758
AEI50426.1
Acriflavin resistance protein.
  
  0.758
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.