STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48239.1NusG antitermination factor. (184 aa)    
Predicted Functional Partners:
AEI48244.1
DNA-directed RNA polymerase subunit beta.
 
 0.996
AEI48240.1
Ribosomal protein L11.
 
 0.995
AEI48245.1
DNA-directed RNA polymerase subunit beta'.
 
 0.988
AEI49393.1
NusA antitermination factor.
 
 0.988
AEI48242.1
50S ribosomal protein L10.
 
 
 0.985
AEI48119.1
Ribosomal protein S3.
 
 
 0.984
AEI48243.1
50S ribosomal protein L7/L12.
 
 
 0.984
AEI48241.1
Ribosomal protein L1.
 
  
 0.982
AEI47123.1
30S ribosomal protein S10.
 
 0.979
AEI48238.1
Preprotein translocase, SecE subunit.
  
  
 0.977
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.