STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48390.1Phosphonate-transporting ATPase. (225 aa)    
Predicted Functional Partners:
AEI48388.1
Protein of unknown function DUF214.
 
 
 0.983
AEI47068.1
Protein of unknown function DUF214.
   0.979
AEI47490.1
Protein of unknown function DUF214.
   0.978
AEI48367.1
Protein of unknown function DUF214.
 
 
 0.964
AEI48384.1
Protein of unknown function DUF214.
 
 
 0.963
AEI48763.1
Protein of unknown function DUF214.
 
 
 0.962
AEI49478.1
Protein of unknown function DUF214.
 
 
 0.961
AEI48371.1
Protein of unknown function DUF214.
 
   0.863
AEI48360.1
Protein of unknown function DUF214.
 
   0.862
AEI48370.1
Protein of unknown function DUF214.
 
   0.861
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.