STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48392.1Efflux transporter, RND family, MFP subunit. (435 aa)    
Predicted Functional Partners:
AEI48395.1
Integral membrane sensor signal transduction histidine kinase.
 
     0.893
AEI48367.1
Protein of unknown function DUF214.
 
 
 0.856
AEI48384.1
Protein of unknown function DUF214.
 
 
 0.856
AEI48388.1
Protein of unknown function DUF214.
 
 
 0.856
AEI48763.1
Protein of unknown function DUF214.
 
 
 0.849
AEI49478.1
Protein of unknown function DUF214.
 
 
 0.848
AEI48390.1
Phosphonate-transporting ATPase.
 
   0.839
Runsl_1946
Putative ABC transport system permease protein.
 
   0.821
AEI48366.1
Protein of unknown function DUF214.
 
   0.821
AEI48368.1
Protein of unknown function DUF214.
 
   0.821
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.