STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48421.1Peptide methionine sulfoxide reductase msrA. (217 aa)    
Predicted Functional Partners:
AEI47409.1
methionine-R-sulfoxide reductase.
 
 0.988
AEI50934.1
Peptide methionine sulfoxide reductase msrB.
 
 0.988
AEI47467.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.822
AEI48966.1
Redoxin domain protein.
   
 0.780
AEI49808.1
Hypothetical protein.
   
 0.780
AEI51747.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
   
 0.780
AEI48429.1
Thioredoxin domain-containing protein.
   
 
 0.760
AEI48554.1
Protein-disulfide reductase.
   
 
 0.760
AEI47526.1
GAF domain-containing protein.
 
    
 0.680
AEI50501.1
Peptidylprolyl isomerase FKBP-type.
    
 0.665
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.