STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48429.1Thioredoxin domain-containing protein. (148 aa)    
Predicted Functional Partners:
AEI49808.1
Hypothetical protein.
 
 
 0.895
AEI48421.1
Peptide methionine sulfoxide reductase msrA.
   
 
 0.815
AEI47467.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.735
AEI48966.1
Redoxin domain protein.
 
 
 0.690
AEI51747.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
 
 
 0.690
AEI47409.1
methionine-R-sulfoxide reductase.
   
 
 0.628
AEI50934.1
Peptide methionine sulfoxide reductase msrB.
   
 
 0.628
Runsl_3052
Peptidase C39 bacteriocin processing.
  
 
 0.560
AEI50161.1
Hypothetical protein.
  
 
 0.560
AEI48430.1
Hypothetical protein.
       0.553
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (26%) [HD]