STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48430.1Hypothetical protein. (578 aa)    
Predicted Functional Partners:
AEI49068.1
Cytochrome c class I.
 
     0.779
AEI48048.1
Blue (type 1) copper domain protein.
  
     0.775
AEI48295.1
Cytochrome c class I.
 
     0.740
AEI46663.1
Glucose/sorbosone dehydrogenase.
  
     0.726
AEI48910.1
Xylose isomerase domain-containing protein TIM barrel.
  
     0.707
Runsl_0537
Quinoprotein glucose dehydrogenase.
  
     0.675
AEI49147.1
Cytochrome c class I.
 
     0.649
AEI50976.1
Membrane-bound dehydrogenase domain protein.
  
     0.628
AEI46472.1
Membrane-bound dehydrogenase domain protein.
 
     0.598
AEI48229.1
Hypothetical protein.
  
     0.598
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.