STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48436.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
AEI47091.1
Hypothetical protein.
  
     0.737
AEI50976.1
Membrane-bound dehydrogenase domain protein.
  
     0.659
AEI47309.1
Hypothetical protein.
  
     0.650
AEI51893.1
Protein of unknown function DUF1080.
  
     0.560
AEI49496.1
FG-GAP repeat-containing protein.
  
     0.546
AEI47308.1
Membrane-bound dehydrogenase domain protein.
  
     0.543
AEI47093.1
Protein of unknown function DUF1080.
  
     0.537
AEI48844.1
Acetyl xylan esterase.
  
     0.512
AEI47070.1
Heme-binding protein.
  
     0.511
AEI48435.1
Hypothetical protein.
       0.495
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.