STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48510.1Hypothetical protein. (828 aa)    
Predicted Functional Partners:
AEI50317.1
Hypothetical protein.
  
     0.674
AEI49375.1
Surface antigen (D15).
 
 
 0.666
AEI48622.1
Protein of unknown function DUF303 acetylesterase.
  
     0.642
AEI48514.1
Hypothetical protein.
  
     0.608
AEI47886.1
Hypothetical protein.
  
     0.606
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
     0.577
AEI47656.1
Hypothetical protein.
 
     0.566
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
     0.563
AEI48832.1
TonB-dependent receptor.
  
     0.547
AEI48831.1
Protein of unknown function, Porph ging.
  
     0.544
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.