STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48511.1Sulfate-transporting ATPase. (236 aa)    
Predicted Functional Partners:
AEI50206.1
Gliding motility-associated ABC transporter permease protein GldF.
 
 0.888
AEI48008.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
 
  
 0.792
AEI48512.1
Hypothetical protein.
       0.551
AEI48390.1
Phosphonate-transporting ATPase.
   
0.544
AEI48510.1
Hypothetical protein.
       0.523
AEI46573.1
Nitrous-oxide metabolic protein NosY.
  
 
 0.484
AEI49531.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.413
AEI50184.1
Phosphonate-transporting ATPase.
   
0.407
AEI50477.1
Gliding motility-associated lipoprotein GldJ.
  
   
 0.400
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.