STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48513.1GTP cyclohydrolase-2. (416 aa)    
Predicted Functional Partners:
AEI48310.1
Riboflavin synthase, alpha subunit.
 
 0.999
AEI48438.1
6,7-dimethyl-8-ribityllumazine synthase.
 
 0.999
AEI49543.1
Riboflavin biosynthesis protein RibD.
 0.999
AEI51559.1
GTP cyclohydrolase 1.
 
 
 0.950
AEI50507.1
Molybdenum cofactor biosynthesis protein A.
    
 0.906
AEI51876.1
Inosine-5'-monophosphate dehydrogenase.
  
  
 0.899
AEI47590.1
Ribosomal protein S2.
   
  
 0.898
AEI48787.1
Nucleoside diphosphate kinase.
  
 0.893
AEI49949.1
(p)ppGpp synthetase I, SpoT/RelA.
  
 
 0.856
AEI49180.1
Transcriptional regulator, AraC family.
    
  0.842
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.