STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48519.1Putative transcriptional acitvator, Baf family. (258 aa)    
Predicted Functional Partners:
AEI47353.1
Pantothenate synthetase.
  
 
 0.952
AEI50586.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase.
 
 
 0.934
AEI50136.1
Phosphopantetheine adenylyltransferase.
 
  
 0.928
AEI50541.1
Putative transcriptional acitvator, Baf family.
  
  
 
0.927
AEI51694.1
Acyl carrier protein phosphodiesterase.
     
  0.900
AEI47354.1
Aspartate 1-decarboxylase.
 
  
 0.824
AEI49530.1
biotin/acetyl-CoA-carboxylase ligase.
 
    0.496
AEI48520.1
Beta-galactosidase.
       0.467
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.