STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48543.1Cys/Met metabolism pyridoxal-phosphate-dependent protein. (396 aa)    
Predicted Functional Partners:
AEI51593.1
Methionine synthase.
  
 
 0.971
AEI51607.1
Homoserine O-acetyltransferase.
  
 0.948
AEI46951.1
Methionine synthase vitamin-B12 independent.
  
 
 0.944
AEI51109.1
Methionine synthase vitamin-B12 independent.
  
 
 0.944
AEI46858.1
Aspartate kinase.
 
 
 0.939
AEI50959.1
Cystathionine beta-lyase.
 
 
 0.935
AEI51679.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
 
 
0.934
AEI48939.1
Ferredoxin--nitrite reductase.
  
 0.926
AEI50980.1
Flavodoxin/nitric oxide synthase.
  
 0.921
AEI51025.1
Adenosylhomocysteinase.
  
 0.920
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.