STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48554.1Protein-disulfide reductase. (685 aa)    
Predicted Functional Partners:
AEI48421.1
Peptide methionine sulfoxide reductase msrA.
   
 
 0.760
AEI48707.1
Ribosomal subunit interface protein.
 
     0.702
AEI47467.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.695
AEI46551.1
Protein of unknown function, membrane YfhO.
  
     0.683
AEI48553.1
Hypothetical protein.
       0.655
AEI51601.1
Hypothetical protein.
  
     0.654
AEI48966.1
Redoxin domain protein.
  
 
 0.647
AEI49808.1
Hypothetical protein.
  
 
 0.647
AEI51747.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.647
AEI49878.1
Uroporphyrinogen III synthase HEM4.
  
     0.646
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.