STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48559.1Aminoglycoside phosphotransferase. (357 aa)    
Predicted Functional Partners:
AEI48252.1
(R)-benzylsuccinyl-CoA dehydrogenase.
 
 0.982
AEI48648.1
Butyryl-CoA dehydrogenase.
 
 
 0.917
AEI47536.1
NADPH:quinone reductase.
 
   0.726
AEI48646.1
Enoyl-CoA hydratase.
 
 
 0.709
AEI46628.1
Butyryl-CoA dehydrogenase.
 
 
 0.701
AEI48179.1
Butyryl-CoA dehydrogenase.
 
 
 0.697
AEI50637.1
Carbonyl reductase (NADPH).
 0.671
AEI49567.1
Butyryl-CoA dehydrogenase.
 
 
 0.617
AEI50525.1
o-succinylbenzoate--CoA ligase.
 
 
 0.601
AEI48091.1
Nitrate reductase.
  
    0.558
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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