STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48567.1Ion transport protein. (281 aa)    
Predicted Functional Partners:
AEI50768.1
Molybdopterin biosynthesis MoaE protein.
   
    0.778
AEI48568.1
Glycosyl transferase group 1.
  
    0.777
AEI49878.1
Uroporphyrinogen III synthase HEM4.
  
    0.747
AEI48569.1
Fmu (Sun) domain protein.
  
    0.706
AEI48565.1
Hypothetical protein.
       0.495
AEI48566.1
Peptidase S8 and S53 subtilisin kexin sedolisin.
       0.495
AEI51097.1
tryptophanyl-tRNA synthetase.
 
  
 0.458
AEI49893.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
  
 0.453
AEI51876.1
Inosine-5'-monophosphate dehydrogenase.
  
  
 0.447
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
 0.421
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.