STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48569.1Fmu (Sun) domain protein. (452 aa)    
Predicted Functional Partners:
AEI46519.1
Methionyl-tRNA formyltransferase.
 
  
 0.884
AEI48242.1
50S ribosomal protein L10.
   
 
 0.790
AEI48107.1
Ribosomal protein L30.
   
 
 0.786
AEI48109.1
Ribosomal protein L18.
   
 
 0.763
AEI48123.1
Ribosomal protein L25/L23.
   
 
 0.761
AEI48114.1
Ribosomal protein L24.
   
   0.755
AEI48125.1
50S ribosomal protein L3.
   
   0.755
AEI48273.1
Ribosomal RNA large subunit methyltransferase N.
  
  
 0.755
AEI48124.1
Ribosomal protein L4/L1e.
   
   0.743
AEI48120.1
Ribosomal protein L22.
   
   0.741
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.