STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48580.1Peptidase S8 and S53 subtilisin kexin sedolisin. (934 aa)    
Predicted Functional Partners:
AEI48579.1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
     
 0.767
AEI48581.1
Peptidase S8 and S53 subtilisin kexin sedolisin.
 
    
0.750
AEI51509.1
Forkhead-associated protein.
   
 
 0.637
AEI48577.1
Molybdopterin-guanine dinucleotide biosynthesis protein A.
       0.632
AEI48578.1
Alpha/beta hydrolase fold protein.
       0.632
AEI48222.1
TonB-dependent receptor plug.
  
     0.561
AEI48221.1
Hypothetical protein.
  
    0.554
AEI51506.1
Protein serine/threonine phosphatase.
 
 
 0.494
AEI50058.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 
 0.481
AEI48582.1
Malonate transporter, MadM subunit.
       0.465
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.