STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48580.1Peptidase S8 and S53 subtilisin kexin sedolisin. (934 aa)    
Predicted Functional Partners:
AEI48579.1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
     
 0.768
AEI48581.1
Peptidase S8 and S53 subtilisin kexin sedolisin.
 
    
0.751
AEI47448.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
 
 0.650
AEI48577.1
Molybdopterin-guanine dinucleotide biosynthesis protein A.
       0.632
AEI48578.1
Alpha/beta hydrolase fold protein.
       0.632
AEI51509.1
Forkhead-associated protein.
   
 
 0.590
AEI48222.1
TonB-dependent receptor plug.
  
     0.561
AEI48221.1
Hypothetical protein.
  
    0.551
AEI51506.1
Protein serine/threonine phosphatase.
 
 
 0.533
AEI50058.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 
 0.491
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.