STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48590.1ArsC family protein. (114 aa)    
Predicted Functional Partners:
AEI48098.1
DNA-directed RNA polymerase subunit alpha.
    
 
 0.862
AEI50438.1
DSBA oxidoreductase.
   
 
 0.859
AEI50795.1
DsbA oxidoreductase.
   
 
 0.859
AEI50967.1
RNA polymerase, sigma 70 subunit, RpoD subfamily.
    
 
 0.850
AEI48245.1
DNA-directed RNA polymerase subunit beta'.
    
   0.846
AEI48210.1
Glycine cleavage system H protein.
  
 
 0.805
AEI50587.1
Hypothetical protein.
   
   0.591
AEI48244.1
DNA-directed RNA polymerase subunit beta.
    
 
 0.563
AEI48589.1
UDP-N-acetylglucosamine 2-epimerase.
     
 0.560
AEI48591.1
Hypothetical protein.
       0.554
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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