STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48592.1Phosphonate-transporting ATPase. (248 aa)    
Predicted Functional Partners:
AEI51742.1
Protein of unknown function DUF140.
 
 0.996
AEI49308.1
Protein of unknown function DUF140.
 
 0.992
AEI49440.1
Mammalian cell entry related domain protein.
 
 0.982
AEI49310.1
Mammalian cell entry related domain protein.
 
 0.965
AEI49309.1
Sulfate-transporting ATPase.
  
  
 
0.911
AEI50713.1
Sulfate transporter/antisigma-factor antagonist STAS.
   
 
 0.819
AEI48593.1
Sec-independent protein translocase, TatC subunit.
       0.781
AEI47591.1
Ribosomal protein S9.
  
     0.656
AEI51486.1
ABC transporter related protein.
  
     0.560
AEI48108.1
Ribosomal protein S5.
  
     0.556
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.