STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48600.1Protein of unknown function DUF820. (216 aa)    
Predicted Functional Partners:
AEI48601.1
Histidinol phosphate phosphatase HisJ family.
       0.773
AEI50046.1
Protein of unknown function DUF820.
  
     0.741
AEI50078.1
Protein of unknown function DUF820.
  
     0.740
AEI47029.1
Protein of unknown function DUF820.
  
     0.734
AEI51029.1
Protein of unknown function DUF820.
  
     0.732
AEI49574.1
Protein of unknown function DUF820.
  
     0.723
AEI47983.1
Protein of unknown function DUF820.
  
     0.706
AEI46684.1
Protein of unknown function DUF820.
  
     0.701
AEI50430.1
Protein of unknown function DUF820.
  
     0.694
AEI48915.1
Protein of unknown function DUF820.
  
     0.665
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.