STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48624.1Adenylate kinase. (189 aa)    
Predicted Functional Partners:
AEI48105.1
Preprotein translocase, SecY subunit.
 
  
 0.978
AEI48787.1
Nucleoside diphosphate kinase.
 
 0.973
AEI48115.1
Ribosomal protein L14.
 
 
 0.954
AEI48225.1
Hypoxanthine phosphoribosyltransferase.
 
  
 0.944
AEI48100.1
30S ribosomal protein S11.
 
 
 0.941
AEI48108.1
Ribosomal protein S5.
 
  
 0.941
AEI48101.1
30S ribosomal protein S13.
 
  
 0.939
AEI48113.1
Ribosomal protein L5.
 
  
 0.937
AEI48106.1
Ribosomal protein L15.
 
  
 0.936
AEI48122.1
Ribosomal protein L2.
 
  
 0.933
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.