STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48626.1Integral membrane sensor signal transduction histidine kinase. (596 aa)    
Predicted Functional Partners:
AEI47842.1
Two component transcriptional regulator, winged helix family.
  
  0.978
AEI48627.1
Two component transcriptional regulator, winged helix family.
 
   0.951
AEI48656.1
Multi-sensor hybrid histidine kinase.
 
 
0.861
AEI49506.1
Two component transcriptional regulator, AraC family.
 
 
 0.851
AEI51397.1
Multi-sensor hybrid histidine kinase.
  
 
 0.836
AEI50179.1
Two component transcriptional regulator, winged helix family.
 
   0.833
AEI48538.1
Two component transcriptional regulator, winged helix family.
 
   0.830
AEI49762.1
Response regulator receiver protein.
 
   0.826
AEI47618.1
Two component transcriptional regulator, AraC family.
 
 
0.821
AEI51730.1
Two component transcriptional regulator, AraC family.
 
 
 0.820
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.