STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48697.12-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. (223 aa)    
Predicted Functional Partners:
AEI48696.1
PfkB domain protein.
 
 0.994
AEI50344.1
PfkB domain protein.
 
 0.983
AEI51330.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
  
  
 
0.920
AEI50896.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
  
 
 0.856
AEI48695.1
Uronate isomerase.
 
   
 0.847
AEI50381.1
Glucose-6-phosphate isomerase.
  
 
 0.847
AEI47200.1
Pyruvate kinase.
    
 0.843
AEI48993.1
Fructose-bisphosphate aldolase, class II.
    
 0.831
AEI50870.1
Enolase.
     
 0.830
AEI51843.1
Triosephosphate isomerase.
     
 0.830
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.