STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48700.1Phosphoglycerate kinase. (395 aa)    
Predicted Functional Partners:
AEI50896.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
 0.999
AEI51843.1
Triosephosphate isomerase.
 
 0.999
AEI50870.1
Enolase.
 
 
 0.995
AEI50867.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
  
 
 0.976
AEI47200.1
Pyruvate kinase.
 
 
 0.965
AEI48993.1
Fructose-bisphosphate aldolase, class II.
  
 
 0.965
AEI50381.1
Glucose-6-phosphate isomerase.
 
 
 0.940
AEI48189.1
Phosphoenolpyruvate carboxylase.
  
 
 0.873
AEI48043.1
ATP synthase subunit beta.
  
 
 0.850
AEI47383.1
ATP synthase subunit alpha.
  
 
 0.821
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.