STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48709.1Phenylalanyl-tRNA synthetase alpha chain. (346 aa)    
Predicted Functional Partners:
AEI48480.1
Phenylalanyl-tRNA synthetase beta chain.
 
 0.999
AEI46692.1
Methionyl-tRNA synthetase.
 
 
 0.974
AEI50236.1
Export-related chaperone CsaA.
  
 
 0.929
AEI50968.1
Polyribonucleotide nucleotidyltransferase.
  
  
 0.851
AEI47122.1
Translation elongation factor G.
 
 
 0.811
AEI48098.1
DNA-directed RNA polymerase subunit alpha.
 
  
 0.794
AEI48835.1
Ribosomal protein S7.
  
  
 0.780
AEI50184.1
Phosphonate-transporting ATPase.
 
 
   0.743
AEI49650.1
O-sialoglycoprotein endopeptidase.
 
   
 0.725
AEI50441.1
tRNA (guanine-N(1)-)-methyltransferase.
 
  
 0.720
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.