STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48721.1Methyltransferase type 11. (248 aa)    
Predicted Functional Partners:
AEI50948.1
ABC-1 domain-containing protein.
   
 
 0.789
Runsl_0791
Polynucleotide 5'-hydroxyl-kinase.
   
   0.772
AEI48610.1
Hypothetical protein.
   
   0.772
AEI48611.1
Hypothetical protein.
   
   0.772
AEI46923.1
Monooxygenase FAD-binding protein.
  
 0.761
AEI46962.1
Hypothetical protein.
  
 0.761
AEI46963.1
FAD dependent oxidoreductase.
  
 0.761
AEI46970.1
4-hydroxybenzoate 3-monooxygenase.
  
 0.761
AEI49655.1
Hypothetical protein.
   
   0.617
AEI48946.1
FAD dependent oxidoreductase.
  
 
 0.449
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.