STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48731.1Proton-translocating NADH-quinone oxidoreductase, chain L. (636 aa)    
Predicted Functional Partners:
AEI48730.1
Proton-translocating NADH-quinone oxidoreductase, chain M.
 
0.996
AEI48732.1
NAD(P)H-quinone oxidoreductase subunit 4L.
 
 
 0.992
AEI50089.1
NAD(P)H-quinone oxidoreductase subunit 1.
 
 
 0.980
AEI51803.1
NAD(P)H-quinone oxidoreductase subunit 1.
 
 
 0.980
AEI51805.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 6.
 
 
 0.980
AEI50495.1
NAD(P)H-quinone oxidoreductase subunit 4L.
 
 
 0.979
AEI51798.1
NAD(P)H-quinone oxidoreductase subunit J.
 
 
 0.978
AEI51799.1
NAD(P)H-quinone oxidoreductase subunit H.
 
 
 0.977
AEI48729.1
NAD(P)H-quinone oxidoreductase subunit 2.
 
 
0.975
AEI48134.1
NAD(P)H-quinone oxidoreductase subunit J.
 
 
 0.973
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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