STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48741.1Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B. (495 aa)    
Predicted Functional Partners:
AEI47943.1
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
 
 0.999
AEI49404.1
Glutamyl-tRNA(Gln) amidotransferase subunit A.
 0.999
AEI48184.1
Asparaginyl-tRNA synthetase.
 
 0.998
AEI50510.1
aspartyl-tRNA synthetase.
 
 0.994
AEI46813.1
Amidase.
 
 0.993
AEI51556.1
Glutaminyl-tRNA synthetase.
  
 0.982
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
  
  
 0.885
AEI48599.1
glutamyl-tRNA synthetase.
 
 
 0.860
AEI48480.1
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.749
AEI48201.1
Cell division protein FtsZ.
  
  
 0.707
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.