STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48759.1Xylose isomerase domain-containing protein TIM barrel. (307 aa)    
Predicted Functional Partners:
AEI51300.1
Xylose isomerase domain-containing protein TIM barrel.
  
     0.765
AEI49830.1
Hypothetical protein.
  
     0.726
AEI48209.1
Hypothetical protein.
  
     0.721
AEI51641.1
Hypothetical protein.
  
     0.702
AEI51229.1
RagB/SusD domain-containing protein.
  
     0.697
AEI51332.1
Hypothetical protein.
  
     0.677
AEI51462.1
Response regulator receiver protein.
  
     0.650
AEI51000.1
Lipid A 3-O-deacylase-related protein.
  
     0.645
AEI50363.1
Phosphoesterase.
  
     0.642
AEI51233.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (10%) [HD]