STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48794.1Dihydroneopterin aldolase. (116 aa)    
Predicted Functional Partners:
AEI49427.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
 
 
 0.998
AEI51714.1
Dihydropteroate synthase.
 
 
 0.997
AEI51559.1
GTP cyclohydrolase 1.
 
  
 0.975
AEI51846.1
Phosphodiesterase/alkaline phosphatase D.
     
 0.912
AEI51179.1
Alkaline phosphatase.
     
 0.904
AEI48793.1
DivIVA domain protein.
       0.756
AEI50894.1
FolC bifunctional protein.
 
  
 0.655
AEI48791.1
Nucleoside-triphosphatase rdgB.
  
  
 0.566
AEI49543.1
Riboflavin biosynthesis protein RibD.
  
  
 0.564
AEI48792.1
Peptidase M61 domain protein.
       0.533
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.