STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48799.1Rubredoxin--NAD(+) reductase. (452 aa)    
Predicted Functional Partners:
AEI48041.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 0.831
AEI47839.1
Hypothetical protein.
 
     0.776
AEI49898.1
Hypothetical protein.
  
     0.770
AEI50965.1
Hypothetical protein.
  
     0.760
AEI48949.1
Hypothetical protein.
  
     0.758
AEI47483.1
Glycosyl transferase family 2.
 
     0.756
AEI48841.1
Nitrite reductase (NAD(P)H), small subunit.
 
  
 0.743
AEI49351.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.730
AEI47834.1
Protein of unknown function DUF547.
 
     0.724
AEI47145.1
Rieske (2Fe-2S) iron-sulfur domain protein.
  
  
 0.702
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.