STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48841.1Nitrite reductase (NAD(P)H), small subunit. (112 aa)    
Predicted Functional Partners:
AEI48842.1
Nitrite reductase (NAD(P)H), large subunit.
 0.999
AEI48983.1
Nitrate reductase., Nitrite reductase (NAD(P)H).
 0.997
AEI48984.1
Major facilitator superfamily MFS_1.
 
 
 0.983
Runsl_1927
Glutamate--ammonia ligase.
   
 
 0.910
AEI49257.1
Glutamate--ammonia ligase.
   
 
 0.910
AEI51785.1
Nitrilase.
   
 
  0.901
AEI50503.1
Glutamine synthetase catalytic region.
     
  0.900
AEI50656.1
Glutamate dehydrogenase (NAD(P)(+)).
     
  0.900
AEI48799.1
Rubredoxin--NAD(+) reductase.
 0.893
AEI46886.1
Ferredoxin--NAD(+) reductase.
 0.874
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.