STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48896.1Acyl-(acyl-carrier-protein) desaturase. (327 aa)    
Predicted Functional Partners:
AEI47455.1
Ribonucleoside-diphosphate reductase, alpha subunit.
  
 
 0.956
AEI47166.1
3-oxoacyl-(acyl-carrier-protein) synthase 2.
  
 
 0.909
AEI51485.1
Enoyl-(acyl-carrier-protein) reductase (NADH).
     
 0.907
AEI46638.1
Fatty acid desaturase.
     
  0.900
AEI50489.1
Fatty acid desaturase.
     
  0.900
AEI48897.1
Phospholipid/glycerol acyltransferase.
 
   
 0.795
AEI48244.1
DNA-directed RNA polymerase subunit beta.
 
 
  
 0.739
AEI48245.1
DNA-directed RNA polymerase subunit beta'.
 
 
    0.719
AEI48243.1
50S ribosomal protein L7/L12.
 
      0.716
AEI48240.1
Ribosomal protein L11.
 
      0.695
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.