STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48899.1Sulphate transporter. (517 aa)    
Predicted Functional Partners:
AEI48901.1
Carbonate dehydratase.
 
  
 0.943
AEI47979.1
Carbonate dehydratase.
 
  
 0.903
AEI50815.1
Hypothetical protein.
    
   0.659
AEI48900.1
Sulphate transporter.
 
    
0.601
AEI50707.1
Hypothetical protein.
    
 
 0.445
AEI50982.1
Ankyrin.
    
 
 0.445
AEI48898.1
Hypothetical protein.
       0.438
AEI47165.1
Acyl carrier protein.
    
 
 0.415
AEI48413.1
Phosphopantetheine-binding protein.
    
 
 0.415
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.