STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48930.1Methylglyoxal synthase. (149 aa)    
Predicted Functional Partners:
AEI46710.1
Alcohol dehydrogenase (NADP(+)).
  
 
 0.912
AEI51454.1
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase.
  
  
 0.852
AEI51898.1
Dihydrodipicolinate reductase.
  
    0.810
AEI48929.1
Glutamine amidotransferase of anthranilate synthase.
       0.634
AEI48931.1
NAD+ synthetase.
       0.586
AEI48928.1
PfkB domain protein.
       0.475
AEI48932.1
Hypothetical protein.
  
  
 0.404
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.