STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI48945.13-oxoacyl-(acyl-carrier-protein) reductase. (254 aa)    
Predicted Functional Partners:
AEI51277.1
Glucose 1-dehydrogenase.
  
  
 
0.919
AEI51827.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
  
 
 0.907
AEI46647.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
   
 
  0.901
AEI49654.1
SMP-30/Gluconolaconase/LRE-like region-containing protein.
   
 
  0.901
AEI50222.1
Gluconolactonase.
   
 
  0.901
AEI50870.1
Enolase.
   
 0.840
AEI50896.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
   
 0.837
AEI47111.1
Caffeoyl-CoA O-methyltransferase.
 
  
 
 0.832
AEI51843.1
Triosephosphate isomerase.
   
 0.821
AEI50867.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
   
 0.820
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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