STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI48946.1FAD dependent oxidoreductase. (541 aa)    
Predicted Functional Partners:
AEI51546.1
Cytochrome c oxidase, cbb3-type, subunit I.
  
 
 0.963
AEI51800.1
NADH-quinone oxidoreductase, E subunit.
   
 
 0.928
AEI51802.1
NADH dehydrogenase (quinone).
  
 
 0.915
AEI49357.1
Cytochrome c oxidase subunit I.
  
 
 0.911
AEI46472.1
Membrane-bound dehydrogenase domain protein.
  
 0.894
AEI51043.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.894
AEI49350.1
Cytochrome c class I.
  
 0.891
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
   
 
 0.871
AEI49356.1
Cytochrome c oxidase subunit II.
  
 
 0.869
AEI46530.1
Cytochrome c oxidase subunit III.
  
 
 0.858
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.