STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI49003.1Alcohol dehydrogenase GroES domain protein. (389 aa)    
Predicted Functional Partners:
AEI48946.1
FAD dependent oxidoreductase.
 
  
 0.752
AEI49511.1
3-oxoacyl-(acyl-carrier-protein) reductase.
 
    0.717
AEI47383.1
ATP synthase subunit alpha.
     
 0.634
AEI46601.1
ATP synthase subunit c.
     
 0.633
AEI48043.1
ATP synthase subunit beta.
     
 0.629
AEI51592.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
     0.615
AEI48042.1
ATPase, F1 complex, delta/epsilon subunit.
     
 0.609
AEI48998.1
UDP-galactopyranose mutase.
  
    0.584
AEI51816.1
Beta-lactamase-like protein.
  
   0.566
AEI50776.1
Hypothetical protein.
   
  0.554
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.